Paul McKeigue research group

Usher Institute of Population Health Sciences and Informatics, University of Edinburgh

People

Paul McKeigue

Marco Colombo

Athina Spiliopoulou

Joe Mellor

Software

GENOSCORES

A platform for calculating genotypic predictors of binary and quantitative phenotypes

GeneImp

A program to impute SNP genotypes from ultra-low coverage whole genome sequencing data

ADMIXMAP

A program to model admixture using ancestry-informative markers

Preprint with accompanying R script

McKeigue P. Sample size requirements for learning to classify with high-dimensional biomarker panels. Stat Methods Med Res 2017, in press
R script for calculating sample size and plotting learning curve

Other

Biomedical Data Science lecture slides

This are the lecture notes of the course taught in the academic year 2016/2017 by Marco Colombo as part of the MSc in Operational Research (with Data Science).