Paul McKeigue research group

Usher Institute of Population Health Sciences and Informatics, University of Edinburgh

People

Paul McKeigue

Marco Colombo

Athina Spiliopoulou

Joe Mellor

Software

GENOSCORES

A platform for calculating genotypic predictors of binary and quantitative phenotypes

GeneImp

A program to impute SNP genotypes from ultra-low coverage whole genome sequencing data

ADMIXMAP

A program to model admixture using ancestry-informative markers

Preprint with accompanying R script

McKeigue P. Sample size requirements for learning to classify with high-dimensional biomarker panels. Stat Methods Med Res 2017, in press
R script for calculating sample size and plotting learning curve

Teaching

Biomedical Data Science

See the lecture notes and the lab material for the Biomedical Data Science course taught in the academic year 2017/2018 by Marco Colombo as part of the MSc in Operational Research (with Data Science) and the MSc in Statistics.